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User tutorials
Here are some tutorials that do not exists in the old wiki. TO keep in the merge…
Installation
GroIMP is a pure Java application, therefore a Java Virtual Machine should be installed before installing GroIMP. GroIMP releases consist the compiled executable and a pre-packaged versions for each Windows x64, Mac, and Linux (containing not just the GroIMP executable, but also its dependencies).
Plugins
GroIMP is designed around a Plugin architecture. The plugins can be added and removed from the software to fit the features wanted.
Basic GUI manipulations
Presentation of the commons panels and some basic GUI manipulations. Additionally: Use the GroIMP software (video tutorials)
Exercices
Additional interfaces
Besides the Graphical user interface that is used in GroIMP by default, it is possible to execute models in other ways. The different User interface are described in the user-guide
This can be useful for specific scenarios such as larger pipelines or remote execution. On this page you can find a collection of tutorials to get started with the different additional users interfaces.
2D visualizazion
Also some 1D.
Dataset
GroIMP internal dataset structures
Errors to avoid
Some common practices that can lead to issues.
Fitting algorithms
Integrated parameter fitting algorithms.
GroGRA - Shoot analyses
Analyzing models and imported plants using GroIMP features with the set of GroGrA functions.
MTG
How to interact with MTGs (from OpenAlea) in GroIMP.
QSM
Use QSM in GroIMP.
Selecting data
How to click.
Virtual Skeletonization
Amazing tool: